diff -Nru r-cran-hdf5-1.6.10/debian/changelog r-cran-hdf5-1.6.10/debian/changelog
--- r-cran-hdf5-1.6.10/debian/changelog	2014-07-31 20:05:40.000000000 +0200
+++ r-cran-hdf5-1.6.10/debian/changelog	2014-07-26 15:38:05.000000000 +0200
@@ -1,3 +1,11 @@
+r-cran-hdf5 (1.6.10-2.1) unstable; urgency=low
+
+  * Non-maintainer upload.
+  * Support hdf5 1.8.13 new packaging layout.
+  * New patch with-hdf5.patch: fix HDF5LDFLAGS in configure.in.
+
+ -- Gilles Filippini <pini@debian.org>  Sat, 26 Jul 2014 15:33:24 +0200
+
 r-cran-hdf5 (1.6.10-2) unstable; urgency=low
 
   * debian/control: Set Build-Depends: to current R version
diff -Nru r-cran-hdf5-1.6.10/debian/patches/series r-cran-hdf5-1.6.10/debian/patches/series
--- r-cran-hdf5-1.6.10/debian/patches/series	1970-01-01 01:00:00.000000000 +0100
+++ r-cran-hdf5-1.6.10/debian/patches/series	2014-07-26 15:35:23.000000000 +0200
@@ -0,0 +1 @@
+with-hdf5.patch
diff -Nru r-cran-hdf5-1.6.10/debian/patches/with-hdf5.patch r-cran-hdf5-1.6.10/debian/patches/with-hdf5.patch
--- r-cran-hdf5-1.6.10/debian/patches/with-hdf5.patch	1970-01-01 01:00:00.000000000 +0100
+++ r-cran-hdf5-1.6.10/debian/patches/with-hdf5.patch	2014-07-26 15:45:04.000000000 +0200
@@ -0,0 +1,26 @@
+Index: r-cran-hdf5-1.6.10/configure.in
+===================================================================
+--- r-cran-hdf5-1.6.10.orig/configure.in	2011-05-11 02:02:04.000000000 +0200
++++ r-cran-hdf5-1.6.10/configure.in	2014-07-26 15:36:44.251388180 +0200
+@@ -15,7 +15,7 @@
+ if test -n "$with_hdf5"; then
+   HDF5LDFLAGS="-L${with_hdf5}/lib"
+   if test `uname -s` != "Darwin"; then
+-    HDF5LDFLAGS="-Wl,-rpath,${with_hdf5}/lib"
++    HDF5LDFLAGS="-Wl,-L,${with_hdf5}/lib"
+   fi
+   HDF5CPPFLAGS=-I${with_hdf5}/include
+ fi
+Index: r-cran-hdf5-1.6.10/configure
+===================================================================
+--- r-cran-hdf5-1.6.10.orig/configure	2011-05-11 02:02:04.000000000 +0200
++++ r-cran-hdf5-1.6.10/configure	2014-07-26 15:44:58.304739655 +0200
+@@ -2201,7 +2201,7 @@
+ if test -n "$with_hdf5"; then
+   HDF5LDFLAGS="-L${with_hdf5}/lib"
+   if test `uname -s` != "Darwin"; then
+-    HDF5LDFLAGS="-Wl,-rpath,${with_hdf5}/lib"
++    HDF5LDFLAGS="-Wl,-L,${with_hdf5}/lib"
+   fi
+   HDF5CPPFLAGS=-I${with_hdf5}/include
+ fi
diff -Nru r-cran-hdf5-1.6.10/debian/rules r-cran-hdf5-1.6.10/debian/rules
--- r-cran-hdf5-1.6.10/debian/rules	2014-07-31 20:05:40.000000000 +0200
+++ r-cran-hdf5-1.6.10/debian/rules	2014-07-31 15:38:31.000000000 +0200
@@ -5,5 +5,6 @@
 
 include /usr/share/R/debian/r-cran.mk
 
-
-
+ifneq ($(wildcard /usr/lib/$(DEB_HOST_MULTIARCH)/hdf5/serial/libhdf5.so),)
+  extraInstallFlags := "--configure-args=--with-hdf5=/usr/lib/$(DEB_HOST_MULTIARCH)/hdf5/serial"
+endif
diff -Nru r-cran-hdf5-1.6.10/debian/source/format r-cran-hdf5-1.6.10/debian/source/format
--- r-cran-hdf5-1.6.10/debian/source/format	1970-01-01 01:00:00.000000000 +0100
+++ r-cran-hdf5-1.6.10/debian/source/format	2014-07-26 16:40:37.000000000 +0200
@@ -0,0 +1 @@
+3.0 (quilt)